01 / FERMENTATION DICTIONARY

Opening up the words of fermentation.

Once the unfamiliar words make sense, you start to see what is actually changing inside the tub.
Illustration of a fermenting jar

Microorganisms

90
16S rRNA analysis
Acetic acid bacteria (Acetobacter / Gluconobacter)
Actinomycetes
Aerobic bacteria / Aerobic microorganisms
Aflatoxin
Anaerobic bacteria / Anaerobic microorganisms
Antagonism
Archaea
Aspergillus kawachii (White koji mold)
Aspergillus luchuensis (Black koji mold)
Aspergillus oryzae
Aspergillus oryzae (Yellow koji mold)
Bacillus
Bacillus subtilis
Bacillus subtilis var. natto
Bacteria
Bacteria
Bacteriophage
Beneficial bacteria / Harmful bacteria
Bifidobacterium
Biofilm
Biosafety Level (BSL)
Cell wall
Cellulase
Colony
Conidia (sing. Conidium)
Contamination
Culture / Cultivation
Culture medium (pl. media)
Epigenetics
Facultative anaerobes
Fermenting microorganisms
Film-forming yeast
Fungi
Genome
Genotype
Gram staining
Growth curve
Halotolerant yeast
Haze (Koji penetration)
Heterofermentative lactic acid bacteria
Homofermentative lactic acid bacteria
Horizontal gene transfer (HGT)
Hypha (pl. Hyphae)
Kefir grains
Koch's postulates
Koji bloom / Koji flower
Lactic acid bacteria (LAB)
Lactobacillus
Lactococcus / Streptococcus (Lactic acid cocci)
Log phase / Exponential phase
Metagenomics
Methanogens (Methanogenic archaea)
Microbial ecology
Microbiota / Microbiome
Microorganism
Mold (Filamentous fungi)
Monascus purpureus (Red koji mold)
Mutant strain
Mycotoxin
National mold of Japan (Kokkin)
Nitrogen-fixing bacteria
Normal flora / Commensal microbiota
Optimal temperature
Penicillium
Phenotype
Photosynthetic bacteria
Plasmid
Prebiotics
Probiotics
Quorum sensing
Rhizopus
Rhizopus oligosporus
Saccharomyces cerevisiae
SCOBY (Symbiotic Culture of Bacteria and Yeast)
Secondary metabolites
Sou-haze (Total koji penetration)
Spoilage bacteria / Spoilage microorganisms
Spore
Starter culture
Stationary phase
Symbiosis
Synthetic biology
Transcriptome
Tsuki-haze (Spot koji penetration)
Virus
Wild yeast
Yeast
Yeast extract
Zygosaccharomyces rouxii

Science

120
Acetic acid fermentation
Advanced Glycation End-products (AGEs)
Aerobic conditions
Aging / Maturation
Alcoholic fermentation
Allosteric regulation
Amadori rearrangement
Amino acid
Amylase
Anaerobic conditions
Antibacterial
Antioxidant
Arrhenius equation
Aspartic acid (L-Aspartic acid)
ATP (Adenosine triphosphate)
Biogenic amines
Biotin (Vitamin B7)
Body
Brix (Degrees Brix)
Butyric acid
Calorie
Catalyst
Chiral compound
Citric acid
Colloid
Color difference (L*a*b* color space)
D-value (Decimal reduction time)
Decomposition / Hydrolysis
Denaturation / Inactivation
Dietary fiber
Electronic nose (E-nose)
Electronic tongue (E-tongue)
Emulsification (Emulsion)
Enantiomer
Entropy
Enzyme
Enzyme activity / Enzyme titer
Equilibrium constant (Keq)
Ester
Ethanol (Ethyl alcohol)
F-value (Sterilization value)
Feedback inhibition (End-product inhibition)
Fermentation
Flavor
Folic acid (Folate / Vitamin B9)
Free amino acids
GABA (Gamma-aminobutyric acid)
GC-MS (Gas Chromatography–Mass Spectrometry)
Gibbs free energy (ΔG)
Glucose
Glutamic acid (L-Glutamic acid)
Glycolysis
Guanylic acid (GMP)
HACCP (Hazard Analysis and Critical Control Points)
Histamine
HPLC (High Performance Liquid Chromatography)
Inosinic acid (IMP)
Isoflavone
Kinetics (Reaction kinetics)
Kojic acid
Lactic acid fermentation
Lipase
Lipid
Maillard reaction
Masking
Mass spectrometry (MS)
Maximum velocity (Vmax)
Melanoidin
Metabolic flux analysis
Metabolomics
Michaelis constant (Km)
Mineral
Moisture
Multiple parallel fermentation
Niacin (Vitamin B3)
NMR (Nuclear Magnetic Resonance)
Non-enzymatic browning
Optimal pH
Optimal temperature (enzyme)
Organic acid
Osmotic pressure
Oxidation
Pectinase
Peptide
pH (potential of hydrogen)
Preservation
Protease
Protein
Proteomics
Putrefaction / Spoilage
Pyruvic acid (Pyruvate)
Q10 (Temperature coefficient)
Radical (Free radical)
Reaction order
Reactive oxygen species (ROS)
Reduction
Rheology
Saccharification
Salinity
Sensory evaluation
Sequential fermentation
Starch
Sterilization
Sterilization / Pasteurization
Strecker degradation
Substrate
Substrate specificity
Succinic acid
TCA cycle (Krebs cycle / Citric acid cycle)
Temperature
Texture
Thermodynamics
Threshold
Titratable acidity
Umami
Umami synergy
Vitamin
Volatile aroma compounds
Water activity (Aw)
Z-value

Practice

140
Accelerated Shelf Life Testing
Aging Period
AI Recipe Optimization
Alcohol Sanitization
Amazake
Amino Nitrogen
Amylase Activity
ATP Bioluminescence Test
Automated Koji-making System
Barley / Wheat
Barley Koji
Batch Process
Bean Koji (Mame-koji)
Bioreactor
Black Bean Miso
Blender
Buai (Ratio/Yield)
Cashew Nut Miso
Chickpea (Cicer arietinum)
Colony Counting
Color Value
Compost
Container / Vessel
Continuous Steaming
De-koji
Dekoji Yield
Draining
Enamel Container
Fermentation Log
Fermentation Period
Fish Sauce (Gyosho)
Food Labeling Act
Food Processor
Formol Nitrogen
Freezing
Good Manufacturing Practice (GMP)
Headspace Analysis
Hi-ire (Pasteurization)
Hiki-komi (Inoculation)
Homogenization
Humidity Control
IoT Monitoring
Judging Completion
Kame (Ceramic jar)
Kioke (Wooden barrel)
Kiri-kaeshi (First turning)
Koji
Koji Enzyme Activity
Koji-buai (Koji ratio)
Koji-buta (Koji tray)
Kusa-bishio (Vegetable sauce)
Labeling
Lentil Miso
Long-term Aging
Lot Management
Mashing
Measuring / Weighing
Microbiological Testing
Mincer
Miso Strainer
Mixing
Moisture Content Measurement
Moisture Design
Mold Removal
Mori (Portioning)
Muro (Koji room)
Naka-shigoto / Shimai-shigoto
Nama-miso (Unpasteurized miso)
Near-infrared Spectroscopy (NIRS)
Nidan-jikomi (Two-stage preparation)
Niku-bishio (Meat sauce)
Nitrogen Index
Non-destructive Testing (NDT)
Non-traditional Substrate
Nori Koji (Seaweed koji)
Nuka-doko (Rice bran bed)
Nuts
Omoshi (Pressing stone)
Otoshi-buta (Drop lid)
Oxygen Absorber
Packing
Particle Size
PDCA in Fermentation
pH Measurement
Photo Documentation
Pistachio Miso
Plastic Wrap (Cling film)
Portioning
Pressure Cooker
Protease Activity
Quality Control (QC)
Quick-fermented White Miso
Ratio / Formula
Recipe Design
Reducing Sugar
Refractometer / Brix meter
Refrigeration
Rice (Oryza sativa)
Rice Koji
Room Temperature Storage
Rotary Drum Koji Making
Salt (Sodium chloride)
Salt Content Design
Sandan-jikomi (Three-stage preparation)
Sanitization / Disinfection
Scale
Scale-up
Seikiku (Koji making)
Sensory Evaluation Panel
Shelf Life Determination
Shikomi (Preparation)
Shio-koji (Salt koji)
Shiokiri (Salt-koji mixing)
Shoyu-koji (Soy sauce koji)
Soaking Soybeans
Solid Content
Solid-state Fermentation (SSF)
Soybean (Glycine max)
Steamer
Steaming Cloth
Steaming Soybeans
Storage Method
Submerged Fermentation
Suribachi (Mortar)
Sweet Potato Koji
Tamari
Tane-koji (Starter koji)
Tane-mizu (Seed water)
Tasting
Temperature Control
Temperature Profile
Tenchi-gaeshi (Top-bottom turning)
Thermometer
Total Nitrogen (TN)
Traceability
Troubleshooting
Vacuum Packing
Water
Water Activity Meter (aw meter)
Zip-lock Bag

Culture

149
Additive-free
AI Taste Analysis
Animism
Art and Science
Awamori
Barley Miso (Mugi-miso)
Bean Miso (Mame-miso)
Beer
Bettara-zuke
Biodiversity
Bioeconomy
Bioplastics
Bioremediation
Black Box
Blended Miso (Awase-miso)
Bread
Brewing / Brewing Arts
Bricolage
Cheese
Chutney
Circular Agriculture
Co-creation
Commons
Complex System
Craft
Craft Beer
Cultured Meat
Dashi (Japanese Stock)
Data-driven Brewing
Digital Twin of Fermentation
Dosa
Doyo
Emergence
Explicit Knowledge
Fermentation and AI
Fermentation and Religion
Fermentation and War
Fermentation Community Development
Fermentation Engineering
Fermentation Tourism
Fermentation vs. Spoilage
Fermented Food
Fluctuation
Food Culture
Food Loss / Food Waste
Food Microbiology
Food Security
Food Tech
Fuchu Miso
Fudo (Climate and Culture)
Funa-zushi
Gastronomy
Geographical Indication (GI)
Globalization of Food
Gomi (Five Tastes)
Gozen Miso
Gut Health / Gut Care
Handcraft / Artisanal Work
Hatcho Miso
Heshiko
History of Fermentation
Ichiju-issai
Ichiya-miso (One-night Miso)
Immunity
Incompleteness
Injera
Intellectual Property in Fermentation
Ishiru / Shottsuru (Fish Sauce)
JAS Standards (Miso)
Kabura-zushi
Kaga Miso
Kaki-su (Persimmon Vinegar)
Kan-jikomi (Winter Preparation)
Kanzuri
Katsuobushi (Dried Bonito)
Kefir
Kimchi
Kitasato Shibasaburo
Kombucha
Koshu Miso
Kura-tsuki Kin (House Microbes)
Kusaya
Literacy (Food Literacy)
Local Cuisine
Local Production for Local Consumption
Methane Fermentation (Anaerobic Digestion)
Microbrewery
Mirin (Hon-mirin)
Miso
Miso Classification Criteria
Miso-dama
Miso-damari
Moromi (Mash)
Mycoprotein
Nara-zuke
Narezushi
Natto
Ni-natsu (Two Summers)
Nukazuke (Rice Bran Pickles)
One Health
Open-source Fermentation
Organic
Pairing
Pasteur and Fermentation Science
Planetary Health
Precision Fermentation
Preserved Food
Red Miso (Aka-miso)
Regenerative
Regional Diversity of Miso
Resilience
Saikyo Miso
Saishikomi Shoyu (Twice-brewed Soy Sauce)
Sakaguchi Kin'ichiro
Sake (Nihonshu)
Sauerkraut
SDGs (Sustainable Development Goals)
Seasoning / Condiment
Sendai Miso
Sense of Wonder
Shiba-zuke
Shinshu Miso
Shochu
Shokuiku (Food Education)
Slow Food
Sokujo (Quick Brewing)
Sourdough
Soy Sauce (Shoyu)
Sunki
Sustainability
Tacit Knowledge
Takamine Jokichi
Tempeh
Tennen-jozo (Natural Brewing)
Terroir
Tofuyo
Tsugaru Miso
Tsukemono (Japanese Pickles)
Umami Seasoning
Uncertainty
Unruly Richness
Upcycling
Vinegar (Su)
Washoku (Japanese Cuisine)
Washoku as Intangible Cultural Heritage
White Miso (Shiro-miso)
Wine
Yogurt
Zymology / Brewing Science